LTE is a long term evolution scheme of 3GPP, as a using extensively communication standards, it has higher data rate and higher quality. Channel estimation plays a quite important role in the LTE system which requires the high data rate and quality. In the article, based on the analysis of the LS and MMSE algorithms of the LTE system, a advised algorithm is adopted. The pilot signal is processed before the channel estimation by reducing noise in time domain. The simulation results demonstrate that the advised algorithm is a preferable choice in estimation performance, simultaneously; the advised has obviously reduced the algorithm complexity.