This paper proposes some suggestions to perfect our current green building assessment system. Green building and ecological building is undoubtedly the trend of construction industry. Green building assessment systems play a directional function for the design, the construction and the use of green architecture. This paper introduces the development of green building assessment system at China and other country firstly. Through the comparison and analysis for some kinds of green building assessment systems, found that that the applicability for buildings and areas and the fairness for ecological environment and surrounding people of current assessment system should be optimized. Finally，proposed that several aspects must be considered, and thus establish the new system-A Green Building Assessment Method Which Based on the Environmental Disturbance and Ecological Compensation.