Analysis of Coexpression Genes in Oryza sativa L. Treated with Low-Energy Ion-Beam

Wan Guang Chen; Yan Zhao Zhang; Yan Wei Cheng; Hui Yuan Ya

doi:10.4028/www.scientific.net/AMM.675-677.1129

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HomeApplied Mechanics and MaterialsApplied Mechanics and Materials Vols. 675-677Analysis of Coexpression Genes in Oryza sativa L....

Analysis of Coexpression Genes in Oryza sativa L. Treated with Low-Energy Ion-Beam

Abstract:

Xindao-18(Oryza sativa L. subsp. japonica Kato) were irratiated with a low-energy ion-beam, the growth form were observed and transcriptome of samples were sequenced by Illumina HiSeq2000 platform. The different expression genes were identified from transcriptomes control and treated samples. Finally, the coexpression of different gene expression were construce and seventy DEGs were annotated as transcription factor (TF). Among them, ten transcripts have the higher network density, and two genes, LOC_Os06g15330 and LOC_Os03g51970, had a still higher network density while elevate PCC paramater, which indicated that the indentified coexpression transcriptors may play important role in response to N+ ion beam treation.

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Periodical:

Applied Mechanics and Materials (Volumes 675-677)

Pages:

1129-1132

DOI:

https://doi.org/10.4028/www.scientific.net/AMM.675-677.1129

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Online since:

October 2014

Authors:

Wan Guang Chen*, Yan Zhao Zhang, Yan Wei Cheng, Hui Yuan Ya

Keywords:

Coexpression, Differential Gene Expression, Low-Energy Ion-Beam, Transcription Factor (TF)

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