Exploring DNA Barcode Information of Selected Thai Medicinal Plants

Suang Rungpragayphan; Perayot Pamonsinlapatham; Busaba Powthongchin; Wikanda Prommanee; Piyaporn Wongakson

doi:10.4028/www.scientific.net/AMR.1060.219

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Exploring DNA Barcode Information of Selected Thai Medicinal Plants
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HomeAdvanced Materials ResearchAdvanced Materials Research Vol. 1060Exploring DNA Barcode Information of Selected Thai...

Exploring DNA Barcode Information of Selected Thai Medicinal Plants

Abstract:

DNA barcode is referred to specific ranges, sequences or fragments of DNA used for identification organisms at genus or species levels. There are several plant DNA barcodes which are currently studied, such as ITS (Internal Transcribed Spacer), ITS2 (Internal Transcribed Spacer 2), matK, psbA-trnH, rbcL, trnL-trnF. In this work, ITS, ITS2 and psbA-trnH sequences of many medicinal plants in the “Thai Medicinal Plant DNA Barcode Database” were studied. Total of 163 DNA barcodes from 75 plant families were processed and analysed. ATCG contents, %GC or %CG found, ATG patterns, and alignment patterns were investigated. Also, sequences relationships among families were discussed. This information will be useful for authentication and quality control of herbal medicine.

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Periodical:

Advanced Materials Research (Volume 1060)

Pages:

219-222

DOI:

https://doi.org/10.4028/www.scientific.net/AMR.1060.219

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Online since:

December 2014

Authors:

Suang Rungpragayphan*, Perayot Pamonsinlapatham, Busaba Powthongchin, Wikanda Prommanee, Piyaporn Wongakson

Keywords:

Blast, DNA Barcode, Medicinal Plants, Sequence Alignment

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