With the development of the Internet, the online shopping was increasingly into people's life. In order to provide convenient search and price comparison service for shopping online, this article designs and implements automatic search and comparison system based on Deep web. To overcome the difficulties of data capture from the current dynamic webpage, the background’s data capture of this system implements by watir. The search module for end-users implements by JavaEE. The practical application shows that this system can fully satisfy people’s needs in search and comparison.