An Approach to Design of DNA Smart Programmable Membranes

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DNA molecules can be considered as a smart material. In particular, synthetic DNA can reliably self-organize. In this paper, we consider an approach to design of active DNA membranes with two stable states. Our approach is based on the usage of SAT-solvers to find proper set of DNA tiles.

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173-176

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May 2014

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© 2014 Trans Tech Publications Ltd. All Rights Reserved

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[1] F. Bennett III, B. Dolin and E. Rieffel: LNCS Vol. 2038 (2001), p.234.

Google Scholar

[2] C.B. Keller and M. Ferrari, U.S. Patent 5, 893, 974. (1999).

Google Scholar

[3] M. Koch, C. Schabmueller, A. Evans and A. Brunnschweiler, in: Proceedings of EUROSENSORS XII, edited by S. Middelhoek and J.W. Gardner, Institute of Physics Publishing (1998).

Google Scholar

[4] Y. Ito: Nanotechnology Vol. 9 (1998), p.205.

Google Scholar

[5] T. F. Otero: Proc. SPIE Vol. 3669 (1999), p.26.

Google Scholar

[6] K. Drexler: Nanosystems: Molecular Machinery, Manufacturing, and Computation (John Wiley & Sons, USA 1992).

Google Scholar

[7] R. Freitas Jr.: Nanotechnology Mag. Vol. 2 (1996), p.8.

Google Scholar

[8] R. Freitas Jr.: Nanomedicine (Landes Bioscience, USA 1999).

Google Scholar

[9] R. Amin, S. Kim, S. Park and T. LaBean: NANO Vol. 4 (2009), p.119.

Google Scholar

[10] T. LaBean, K. Gothelf and J. Reif, in: Nanobiotechnology II: More Concepts and Applications, edited by C.A. Mirkin and C.M. Niemeyer, John Wiley & Sons (2007).

Google Scholar

[11] N. Seeman: Sci. Am. Vol. 290 (2004), p.64.

Google Scholar

[12] K. Lund, B. Williams, Y. Ke, Y. Liu and H. Yan: Curr. Nanosci. Vol. 2 (2006), p.113.

Google Scholar

[13] Z. Deng, Y. Chen, Y. Tian and C. Mao, in: Nanotechnology: Science and Computation, edited by J. Chen, N. Jonoska and G. Rozenberg, Springer-Verlag (2006). P. Rothemund: Nature Vol. 440 (2006), p.297.

Google Scholar

[14] E. Winfree, F. Liu, L. Wenzler and N. Seeman: Nature Vol. 394 (1998), p.539.

Google Scholar

[15] F. Liu, R. Sha and N. Seeman: J. Am. Chem. Soc. Vol. 121 (1999), p.917.

Google Scholar

[16] C. Mao, W. Sun and N. Seeman: J. Am. Chem. Soc. Vol. 121 (1999), p.5437.

Google Scholar

[17] T. LaBean, H. Yan, J. Kopatsch, F. Liu, E. Winfree, J. Reif and N. Seeman: J. Am. Chem. Soc. Vol. 122 (2000), p.1848.

DOI: 10.1021/ja993393e

Google Scholar

[18] C. Mao, T. LaBean, J. Reif and N. Seeman: Nature Vol. 407 (2000), p.493.

Google Scholar

[19] W. Shih, J. Quispe and G. Joyce: Nature Vol. 427 (2004), p.618.

Google Scholar

[20] S. Park, C. Pistol, S. Ahn, J. Reif, A. Lebeck, C. Dwyer and T. LaBean: Angew. Chem. Int. Ed. Vol. 45 (2006), p.735.

DOI: 10.1002/anie.200503797

Google Scholar

[21] M. Mandel and J. Marmur: Meth. Enzymol. Vol. 12 (1968), p.198.

Google Scholar

[22] M. Garey and D. Johnson: Computers and Intractability: A Guide to the Theory of NP-Completeness (W.H. Freeman, USA 1979).

Google Scholar

[23] A. Gorbenko and V. Popov: Theor. Comput. Sci. Vol. 423 (2012), p.19.

Google Scholar

[24] A. Gorbenko and V. Popov: Adv. Studies Theor. Phys. Vol. 6 (2012), p.1235.

Google Scholar

[25] A. Gorbenko and V. Popov: Int. J. Automation and Computing Vol. 9 (2012), p.429.

Google Scholar