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HomeAdvanced Materials ResearchAdvanced Materials Research Vols. 989-9943D Graphical Representation of Protein Sequences...

3D Graphical Representation of Protein Sequences Based on Conformational Parameters of Amino Acids

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Abstract:

Based on the helix and-sheet and the-turn conformational parameters, and and , of the 20 amino acids, we propose a new 3D graphical representation of protein sequence without circuit or degeneracy, which may reflect the innate structure of the protein sequence. Then the numerical characterizations of protein graphs, the leading eigenvalues of the L/L matrices associated with the graphical curves for protein sequences, was utilized as descriptors to analyze the similarity/dissimilarity of the nine ND5 protein sequences.

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Materials Science, Computer and Information Technology

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Periodical:

Advanced Materials Research (Volumes 989-994)

Pages:

3599-3604

DOI:

https://doi.org/10.4028/www.scientific.net/AMR.989-994.3599

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Online since:

July 2014

Authors:

Qian Jun Xiao*, Zong Gang Deng

Keywords:

Graphical Representation, L/L Matrix, Leading Eigenvalue, ND5 Protein Sequences, Similarity

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© 2014 Trans Tech Publications Ltd. All Rights Reserved

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