Checking Adulteration of Aromatic, Amylose Content and Glutinous in Rice by Using Molecular Marker

Article Preview

Abstract:

The purification of rice varieties were tested by using molecular markers. DNA fingerprint is the most accurate method. This research was extracted single milled rice seed varieties, which includes Proteinase K in SDS extraction buffer and 2x CTAB. Three simple sequence repeats (SSRs) markers for varietal purity test are 1) BO3, which completely co-segregate with the rice grain aroma. This primer pair amplifying a 140 bp fragment for an aromatic variety, KDML105 and a 130 bp fragment for a non-aromatic variety, RD29, 41, 49 and rice berry, respectively. 2) RM190, which is closely linked to waxy gene. This primer pair amplifying a 125 bp fragment for low amylose content, Sao-hai, RD 29, RD 41, RD 49 rice varieties and a 110 bp fragments for high amylose varieties, rice berry, KDML 105 and 3) Glu23, which is glutinous marker. This primer pair amplifying a 196 bp fragment for a non-glutinous variety, RD 29, RD 41, RD 49, rice berry and a 225 bp fragments for glutinous varieties, Keaw-Ngoo sticky rice. All markers can be checking adulteration of aromatic, amylose content and glutinous in rice by using molecular Marker.

You have full access to the following eBook

Info:

Periodical:

Pages:

22-25

Citation:

Online since:

October 2016

Export:

Share:

Citation:

* - Corresponding Author

[1] S. R. McCouch, L. Teytelman, Y. Xu, K. B. Lobos, K. Clare, M. Walton, B. Fu, R. Maghirang, Z. Li, Y. Xing, Q. Zhang, I. Kono, M. Yano, R. Fjellstrom, G. De Clerck, D. Schneider, S. Cartinhour, D. Ware, L. Stein, 2002. Development and mapping of 2240 new SSR markers for rice (Oryza sativa L. ). DNA Res, p.199.

DOI: 10.1093/dnares/9.6.199

Google Scholar

[2] S. Wanchana, W. Kamolsukyunyoung, S. Ruengphayak, S. Tragoonrung, T. Toojinda and A. Vanavichit, 2005. A rapid construction of a physical contig across a 4. 5 cM region for rice grain aroma facilitates marker enrichment for positional Cloning. Sci. Asia 31 : pp.299-306.

DOI: 10.2306/scienceasia1513-1874.2005.31.299

Google Scholar

[3] S. Wanchana, T. Toojinda, S. Tragoonrung and A. Vanavichit, 2003. Duplicated coding sequence in the waxy allele of tropical glutinous rice (Oryza sativa L. ) Plant Science. pp.1193-1199.

DOI: 10.1016/s0168-9452(03)00326-1

Google Scholar

[4] C. Payorm, C. Varapong, M. Poonsak, Thai Rice Research Journal, (2007).

Google Scholar