QSPR Studies on n-Octanol/Water Partition Coefficient of Polychlorinated Biphenyls by Using Artificial Neural Network

Article Preview

Abstract:

Quantitative structure property relationship (QSPR) model for predicting the n-octanol/water partition coefficient, Kow, of 21 polychlorinated biphenyls (PCBs) was investigated. The structure of the investigated PCBs is mathematically characterized by using molecular distance-edge vector (MDEV) index, a topological index which is developed based on the topological method. The calibration model of Kow was developed by using radial basis function artificial neural network (RBF ANN). Leave one out cross validation was carried out to assess the predictive ability of the developed QSPR model. The R2 between the predicted and experimental logKow is 0.9793. The prediction RMS%RE for the 21 PCBs is 1.92. It is demonstrated that there is a quantitative relationship between the MDEV index and the Kow of the 21 PCBs. RBF ANN is shown to practicable for developing the QSPR model for Kow of PCBs.

You might also be interested in these eBooks

Info:

Periodical:

Advanced Materials Research (Volumes 455-456)

Pages:

925-929

Citation:

Online since:

January 2012

Authors:

Export:

Price:

Permissions CCC:

Permissions PLS:

Сopyright:

© 2012 Trans Tech Publications Ltd. All Rights Reserved

Share:

Citation:

[1] European Commission, http: /ec. europa. eu/environment/pops/index _en. htm, updated on Jan. 15th (2011).

Google Scholar

[2] X.Y. Han, Z.Y. Wang, Z.C. Zhai, and L.S. Wang, Estimation of n-octanol/water partition coefficients (Kow) of all PCB congeners by ab initio and a Cl substitution position method, QSAR Comb. Sci., vol. 25, p.333 – 341, (2006).

DOI: 10.1002/qsar.200530141

Google Scholar

[3] M.S. Petersen, J. Halling, P. Damkier, F. Nielsen ,P. Grandjean, P. Weihe, et al., Polychlorinated biphenyl (PCB) induction of CYP3A4 enzyme activity in healthy Faroese adults, Toxicol. Appl. Pharma., vol. 224, p.202–206, (2007).

DOI: 10.1016/j.taap.2007.07.002

Google Scholar

[4] P. Rulle, The n-octanol and n-hexane/water partition coefficient of environmentally relevant chemicals predicted from the mobile order and disorder (MOD) thermodynamics, Chemosphere, vol. 40, pp.457-512, (2000).

DOI: 10.1016/s0045-6535(99)00268-4

Google Scholar

[5] J. Padmanabhan, R. Parthasarathi, V. Subramaniana, and P.K. Chattaraj, QSPR models for polychlorinated biphenyls: n-octanol/water partition coefficient, Bioorg. Med. Chem., vol. 14, p.1021–1028, (2006).

DOI: 10.1016/j.bmc.2005.09.017

Google Scholar

[6] D.R. Zhang, QSPR studies of PCBs by the combination of genetic algorithms and PLS analysis, Comput. Chem., vol. 25, pp.197-204, (2001).

DOI: 10.1016/s0097-8485(00)00081-4

Google Scholar

[7] P. Ruiza, O. Faroona, C.J. Moudgal, H. Hansena, C.T. De Rosa, and M. Mumtaz, Prediction of the health effects of polychlorinated biphenyls (PCBs) and their metabolites using quantitative structure–activity relationship (QSAR), , Toxicol. Lett., p.181, 53–65, (2008).

DOI: 10.1016/j.toxlet.2008.06.870

Google Scholar

[8] E.S. Heimstada, and P.L. Andersson, Docking and QSAR studies of an indirect estrogenic effect of hydroxylated PCBs, Quant. Struct. -Act. Relat., vol. 21, pp.257-266, (2002).

DOI: 10.1002/1521-3838(200208)21:3<257::aid-qsar257>3.0.co;2-w

Google Scholar

[9] H.H. Liu , X. Xiao, J. Qin, and Y.M. Liu, Study on structural characteristics and QSPR of polychlorinated biphenyls isomers (PCBs), J. Chongqing Institute of Technology, vol. 19, No. 5., pp.67-70, May, (2005).

Google Scholar

[10] S.S. Liu, H.L. Liu, Z.N. Xia, C.Z. Cao, and Z.L. Li, Molecular distance-edge vector (μ): an extension from alkanes to alcohols, J. Chem. Inf. Comput. Sci., vol. 39. no. 6, pp.951-957, (1999).

DOI: 10.1021/ci990011f

Google Scholar

[11] H.A. Martens, and P. Dardenne, Validation and verification of regression in small data sets., Chemometr. Intell. Lab. Syst., vol. 44, 99–121, (1998).

Google Scholar

[12] L. Jiao, Gao S.Y., Z.H. Jia, and H. Li, Quantification of Benzoic Acid and Salicylic Acid by Capillary Zone Electrophoresis Combined with Artificial Neural Network, Comput. Appl. Chem., vol. 24, pp.1595-1599, (2007).

Google Scholar

[13] Y. X Zhang, H. Li, A.X. Hou, and J. Havel, Artificial neural networks based on principal component analysis input selection for quantification in overlapped capillary electrophoresis peaks,. Chemometr. Intell. Lab. Sys., vol. 82, pp.165-175, (2006).

DOI: 10.1016/j.chemolab.2005.08.012

Google Scholar

[14] V. David, and A. Sanchez, Searching for a solution to the automatic RBF network design problem, Neurocomputing, vol. 42, pp.147-153, (2002).

DOI: 10.1016/s0925-2312(01)00600-2

Google Scholar

[15] X.P. Guo, and Z.J. Wang, An Algorithm for Selecting RBF-ANN Centers of Species Mass in Engine, Computer Science and Information Engineering, 2009 WRI World Congress on, vol. 3, pp.40-42, (2009).

DOI: 10.1109/csie.2009.374

Google Scholar